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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs74662011 chr11:60202346 A/G PRDM6 chr5:122424816-122529960:+ 0.58 5.87 8.01E-9 Box Plot
THCA rs74689501 chr6:26887821 G/A ZFP57 chr6:29640169-29648887:- 0.78 7.71 7.26E-14 Box Plot
THCA rs74724594 chr8:11790576 C/A SGK223 chr8:8175258-8244008:- -0.46 -8.48 2.8E-16 Box Plot
THCA rs7474549 chr10:51822335 T/C FAM21B chr10:47894023-47949412:+ 0.48 7.6 1.54E-13 Box Plot
THCA rs74748137 chr8:11790451 T/G SGK223 chr8:8175258-8244008:- -0.45 -8.43 4.0E-16 Box Plot
THCA rs7475876 chr10:88882384 G/A FAM35B chr10:46897641-46939143:+ -0.37 -7.25 1.64E-12 Box Plot
THCA rs74772984 chr5:43796083 G/A UQCRC1 chr3:48636435-48648409:- -0.35 -6.07 2.66E-9 Box Plot
THCA rs7479622 chr11:49673340 T/G FOLH1B chr11:89372395-89431886:+ -0.33 -6.04 3.04E-9 Box Plot
THCA rs7479641 chr11:48583883 G/A FOLH1B chr11:89372395-89431886:+ 0.43 6.29 7.02E-10 Box Plot
THCA rs7479642 chr11:48553808 G/T FOLH1B chr11:89372395-89431886:+ 0.43 6.25 9.3E-10 Box Plot
THCA rs7479914 chr11:49661351 T/C FOLH1B chr11:89372395-89431886:+ -0.33 -6.08 2.44E-9 Box Plot
THCA rs7479975 chr11:49581964 C/G FOLH1B chr11:89372395-89431886:+ -0.35 -6.44 2.9E-10 Box Plot
THCA rs74800072 chr12:25308727 G/A CSNK2A1P chr11:11373323-11374904:- -0.33 -5.93 5.78E-9 Box Plot
THCA rs7481117 chr11:49653908 G/T FOLH1B chr11:89372395-89431886:+ -0.34 -6.19 1.3E-9 Box Plot
THCA rs7481235 chr11:48599816 T/C FOLH1B chr11:89372395-89431886:+ 0.42 6.26 8.51E-10 Box Plot